Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 AL139288.1-201ENST00000623748 933 ntBASIC16.64■□□□□ 0.25
KRT78Q8N1N4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 AC106820.2-201ENST00000563775 3264 ntBASIC16.64■□□□□ 0.25
KRT78Q8N1N4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT78Q8N1N4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 AC148477.5-201ENST00000625164 1645 ntBASIC16.63■□□□□ 0.25
KRT78Q8N1N4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 LINC02012-201ENST00000608206 1725 ntBASIC16.63■□□□□ 0.25
KRT78Q8N1N4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 MTDHP3-201ENST00000594186 672 ntBASIC16.63■□□□□ 0.25
KRT78Q8N1N4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT78Q8N1N4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.62■□□□□ 0.25
KRT78Q8N1N4 AL356309.3-201ENST00000624132 1934 ntBASIC16.62■□□□□ 0.25
KRT78Q8N1N4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 AC097637.2-201ENST00000624096 1997 ntBASIC16.62■□□□□ 0.25
KRT78Q8N1N4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 PRYP5-201ENST00000451909 266 ntBASIC16.62■□□□□ 0.25
KRT78Q8N1N4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.62■□□□□ 0.25
KRT78Q8N1N4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT78Q8N1N4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.61■□□□□ 0.25
KRT78Q8N1N4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms