Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 AC116407.2-201ENST00000613639 860 ntBASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS52Q8N1B4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 ALG1L5P-201ENST00000482043 771 ntBASIC18.68■□□□□ 0.58
VPS52Q8N1B4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 MIR4469-201ENST00000583919 79 ntBASIC18.68■□□□□ 0.58
VPS52Q8N1B4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 AC100803.2-201ENST00000562459 1963 ntBASIC18.68■□□□□ 0.58
VPS52Q8N1B4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS52Q8N1B4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 AC139713.2-201ENST00000641328 2723 ntBASIC18.67■□□□□ 0.58
VPS52Q8N1B4 GNAS-203ENST00000306120 1878 ntBASIC18.67■□□□□ 0.58
VPS52Q8N1B4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 YBX1P5-201ENST00000509441 847 ntBASIC18.67■□□□□ 0.58
VPS52Q8N1B4 STK19B-204ENST00000512515 211 ntBASIC18.67■□□□□ 0.58
VPS52Q8N1B4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS52Q8N1B4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms