Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 GPS2P2-201ENST00000430745 888 ntBASIC18.57■□□□□ 0.56
HERC6Q8IVU3 GAPDHP21-201ENST00000450301 1010 ntBASIC18.57■□□□□ 0.56
HERC6Q8IVU3 AC087163.2-201ENST00000457299 853 ntBASIC18.57■□□□□ 0.56
HERC6Q8IVU3 AC125807.1-201ENST00000483097 614 ntBASIC18.57■□□□□ 0.56
HERC6Q8IVU3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
HERC6Q8IVU3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 FAM207CP-201ENST00000443486 507 ntBASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AL135744.1-201ENST00000565098 629 ntBASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 AC018470.1-201ENST00000624790 3129 ntBASIC18.56■□□□□ 0.56
HERC6Q8IVU3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERC6Q8IVU3 FO538757.1-201ENST00000623083 1397 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 AL390961.4-201ENST00000623958 2535 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 AC093677.2-201ENST00000600169 1863 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 RBPMS2P1-201ENST00000437762 623 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 LINC02560-201ENST00000596379 459 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 AC008761.3-201ENST00000624803 892 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 AC090164.3-201ENST00000610780 2143 ntBASIC18.55■□□□□ 0.56
HERC6Q8IVU3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERC6Q8IVU3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms