Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
LDB1Q86U70 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LDB1Q86U70 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 EGFEM1P-202ENST00000431685 1563 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.19■□□□□ 0.34
LDB1Q86U70 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
LDB1Q86U70 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
LDB1Q86U70 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LDB1Q86U70 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 AC097637.2-201ENST00000624096 1997 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 AC079776.2-201ENST00000641154 1609 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.19■□□□□ 0.34
LDB1Q86U70 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LDB1Q86U70 TSPY19P-201ENST00000418461 509 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 TSPY18P-201ENST00000441642 509 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.19■□□□□ 0.34
LDB1Q86U70 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.19■□□□□ 0.34
LDB1Q86U70 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.19■□□□□ 0.34
LDB1Q86U70 CLEC4GP1-201ENST00000596555 870 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 AL121772.3-201ENST00000610840 674 ntBASIC17.19■□□□□ 0.34
LDB1Q86U70 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.19■□□□□ 0.34
LDB1Q86U70 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.19■□□□□ 0.34
LDB1Q86U70 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LDB1Q86U70 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.19■□□□□ 0.34
LDB1Q86U70 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LDB1Q86U70 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LDB1Q86U70 AL121761.2-201ENST00000598007 1648 ntBASIC17.18■□□□□ 0.34
LDB1Q86U70 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.18■□□□□ 0.34
LDB1Q86U70 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.18■□□□□ 0.34
LDB1Q86U70 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
LDB1Q86U70 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.18■□□□□ 0.34
LDB1Q86U70 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.18■□□□□ 0.34
LDB1Q86U70 AC091304.2-201ENST00000564639 760 ntBASIC17.18■□□□□ 0.34
LDB1Q86U70 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.18■□□□□ 0.34
LDB1Q86U70 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LDB1Q86U70 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LDB1Q86U70 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.18■□□□□ 0.34
LDB1Q86U70 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
LDB1Q86U70 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LDB1Q86U70 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
LDB1Q86U70 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.18■□□□□ 0.34
LDB1Q86U70 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 AC105020.1-201ENST00000435356 2205 ntBASIC17.17■□□□□ 0.34
LDB1Q86U70 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB1Q86U70 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB1Q86U70 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB1Q86U70 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 KRT18P56-201ENST00000507275 550 ntBASIC17.17■□□□□ 0.34
LDB1Q86U70 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms