Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 AF238378.1-201ENST00000526806 358 ntBASIC11.46□□□□□ -0.57
SCXQ7RTU7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.46□□□□□ -0.57
SCXQ7RTU7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SCXQ7RTU7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SCXQ7RTU7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
SCXQ7RTU7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.46□□□□□ -0.58
SCXQ7RTU7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.58
SCXQ7RTU7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SCXQ7RTU7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SCXQ7RTU7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 AC064862.7-201ENST00000604520 867 ntBASIC11.45□□□□□ -0.58
SCXQ7RTU7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 AC120114.3-201ENST00000611923 658 ntBASIC11.45□□□□□ -0.58
SCXQ7RTU7 TP73-AS1-207ENST00000624167 988 ntBASIC11.45□□□□□ -0.58
SCXQ7RTU7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
SCXQ7RTU7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SCXQ7RTU7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms