Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 AC132872.4-202ENST00000622924 2756 ntBASIC15.61■□□□□ 0.09
SHFQ7M4L6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 MTCL1P1-201ENST00000446207 792 ntBASIC15.61■□□□□ 0.09
SHFQ7M4L6 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.61■□□□□ 0.09
SHFQ7M4L6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 AC139887.4-201ENST00000607877 719 ntBASIC15.61■□□□□ 0.09
SHFQ7M4L6 AC133561.5-201ENST00000635547 218 ntBASIC15.61■□□□□ 0.09
SHFQ7M4L6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 AC092597.1-201ENST00000487352 616 ntBASIC15.6■□□□□ 0.09
SHFQ7M4L6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 AC066615.1-201ENST00000640911 628 ntBASIC15.6■□□□□ 0.09
SHFQ7M4L6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 HYMAI-201ENST00000635591 3347 ntBASIC15.6■□□□□ 0.09
SHFQ7M4L6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.6■□□□□ 0.09
SHFQ7M4L6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHFQ7M4L6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 PCDHA1-201ENST00000378133 2726 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 TERF1P1-201ENST00000311003 1181 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 AC096633.1-201ENST00000422446 749 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 AL359075.1-203ENST00000462729 1002 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 AC068472.1-201ENST00000474589 881 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHFQ7M4L6 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.59■□□□□ 0.09
SHFQ7M4L6 AC097493.4-201ENST00000641197 219 ntBASIC15.59■□□□□ 0.09
SHFQ7M4L6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms