Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 AC104390.1-201ENST00000555663 520 ntBASIC14.16□□□□□ -0.14
TREML4Q6UXN2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 MIR5100-201ENST00000579544 119 ntBASIC14.16□□□□□ -0.14
TREML4Q6UXN2 MIR3180-4-201ENST00000582223 153 ntBASIC14.16□□□□□ -0.14
TREML4Q6UXN2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TREML4Q6UXN2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 MED15P5-201ENST00000423150 992 ntBASIC14.15□□□□□ -0.14
TREML4Q6UXN2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 SCARNA2-201ENST00000458748 420 ntBASIC14.15□□□□□ -0.14
TREML4Q6UXN2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 FAM197Y3-203ENST00000618346 717 ntBASIC14.15□□□□□ -0.14
TREML4Q6UXN2 AC116407.3-201ENST00000623905 1129 ntBASIC14.15□□□□□ -0.14
TREML4Q6UXN2 FAM215A-202ENST00000632077 792 ntBASIC14.15□□□□□ -0.14
TREML4Q6UXN2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.15□□□□□ -0.14
TREML4Q6UXN2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.15□□□□□ -0.15
TREML4Q6UXN2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TREML4Q6UXN2 RPSAP43-201ENST00000402237 625 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms