Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42BPAQ5VT25 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 STARD13-205ENST00000439831 945 ntTSL 2 BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 NAA50-208ENST00000497255 789 ntTSL 5 BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 AC093525.9-201ENST00000624961 1746 ntBASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 AC009477.1-201ENST00000452936 217 ntBASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 PRYP6-201ENST00000514804 343 ntBASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 RARRES2P9-201ENST00000565168 469 ntBASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42BPAQ5VT25 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 KRT8P49-201ENST00000604166 1432 ntBASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 FAM220BP-201ENST00000377689 816 ntBASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 LY6E-204ENST00000519546 971 ntTSL 2 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 AP3S2-216ENST00000617003 1561 ntBASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPAQ5VT25 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 AL080243.2-201ENST00000418783 582 ntBASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 AL844908.2-201ENST00000609461 460 ntBASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 STX3-203ENST00000529177 1571 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 AL138688.1-201ENST00000624851 1594 ntBASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 COQ4-205ENST00000609948 956 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPAQ5VT25 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms