Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.22■□□□□ 0.03
NKX6-1P78426 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 AC103564.2-201ENST00000432853 1299 ntBASIC15.22■□□□□ 0.03
NKX6-1P78426 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-1P78426 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.22■□□□□ 0.03
NKX6-1P78426 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 AC012640.2-201ENST00000561606 901 ntBASIC15.22■□□□□ 0.03
NKX6-1P78426 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 AC008735.5-201ENST00000623544 497 ntBASIC15.22■□□□□ 0.03
NKX6-1P78426 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-1P78426 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 BX276092.7-203ENST00000637198 1536 ntBASIC15.22■□□□□ 0.03
NKX6-1P78426 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NKX6-1P78426 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-1P78426 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.21■□□□□ 0.03
NKX6-1P78426 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.21■□□□□ 0.03
NKX6-1P78426 AC105339.3-201ENST00000560043 636 ntBASIC15.21■□□□□ 0.03
NKX6-1P78426 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
NKX6-1P78426 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.21■□□□□ 0.03
NKX6-1P78426 AD001527.2-201ENST00000622994 785 ntBASIC15.21■□□□□ 0.03
NKX6-1P78426 AP000867.4-201ENST00000641616 219 ntBASIC15.21■□□□□ 0.03
NKX6-1P78426 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-1P78426 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-1P78426 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NKX6-1P78426 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-1P78426 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NKX6-1P78426 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-1P78426 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-1P78426 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.21■□□□□ 0.02
NKX6-1P78426 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.21■□□□□ 0.02
NKX6-1P78426 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
NKX6-1P78426 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NKX6-1P78426 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NKX6-1P78426 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.2■□□□□ 0.02
NKX6-1P78426 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.2■□□□□ 0.02
NKX6-1P78426 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 AC002347.1-201ENST00000569543 541 ntBASIC15.2■□□□□ 0.02
NKX6-1P78426 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.2■□□□□ 0.02
NKX6-1P78426 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-1P78426 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms