Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
RIPPLY3P57055 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIPPLY3P57055 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RIPPLY3P57055 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC002056.1-201ENST00000395613 760 ntBASIC14.27□□□□□ -0.13
RIPPLY3P57055 MRPS18AP1-201ENST00000414458 589 ntBASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 RBPMS2P1-201ENST00000437762 623 ntBASIC14.27□□□□□ -0.13
RIPPLY3P57055 GOLGA2P4-201ENST00000441462 777 ntBASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC106872.11-201ENST00000605838 421 ntBASIC14.27□□□□□ -0.13
RIPPLY3P57055 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC006333.2-201ENST00000607957 2099 ntBASIC14.27□□□□□ -0.13
RIPPLY3P57055 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.27□□□□□ -0.13
RIPPLY3P57055 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIPPLY3P57055 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SPDYE21P-201ENST00000413323 827 ntBASIC14.26□□□□□ -0.13
RIPPLY3P57055 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AL353779.1-201ENST00000434793 351 ntBASIC14.26□□□□□ -0.13
RIPPLY3P57055 AC234783.1-201ENST00000441761 496 ntBASIC14.26□□□□□ -0.13
RIPPLY3P57055 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIPPLY3P57055 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 AC068418.2-201ENST00000577309 3703 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms