Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PER3P56645 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PER3P56645 LAGE3P1-201ENST00000425356 484 ntBASIC15.99■□□□□ 0.15
PER3P56645 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.99■□□□□ 0.15
PER3P56645 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.99■□□□□ 0.15
PER3P56645 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 PGM5P2-202ENST00000637225 1043 ntBASIC15.99■□□□□ 0.15
PER3P56645 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PER3P56645 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.98■□□□□ 0.15
PER3P56645 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.98■□□□□ 0.15
PER3P56645 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PER3P56645 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 DNAJB3-202ENST00000449667 1266 ntBASIC15.98■□□□□ 0.15
PER3P56645 MTDHP4-201ENST00000600287 670 ntBASIC15.98■□□□□ 0.15
PER3P56645 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 AC107918.4-202ENST00000641623 219 ntBASIC15.98■□□□□ 0.15
PER3P56645 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 NKILA-202ENST00000614771 2598 ntBASIC15.98■□□□□ 0.15
PER3P56645 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PER3P56645 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.98■□□□□ 0.15
PER3P56645 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PER3P56645 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.97■□□□□ 0.15
PER3P56645 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PER3P56645 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 AC125634.1-201ENST00000438758 1403 ntBASIC15.97■□□□□ 0.15
PER3P56645 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.97■□□□□ 0.15
PER3P56645 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 UNC93B6-202ENST00000528242 690 ntBASIC15.97■□□□□ 0.15
PER3P56645 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms