Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
EPHA4P54764 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
EPHA4P54764 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA4P54764 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHA4P54764 AC074386.1-202ENST00000463561 864 ntBASIC16.54■□□□□ 0.24
EPHA4P54764 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA4P54764 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHA4P54764 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
EPHA4P54764 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
EPHA4P54764 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA4P54764 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA4P54764 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA4P54764 AC008764.6-201ENST00000595909 2069 ntBASIC16.54■□□□□ 0.24
EPHA4P54764 AC025580.3-201ENST00000617932 1424 ntBASIC16.53■□□□□ 0.24
EPHA4P54764 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
EPHA4P54764 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
EPHA4P54764 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA4P54764 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
EPHA4P54764 HTR5BP-201ENST00000430851 1154 ntBASIC16.53■□□□□ 0.24
EPHA4P54764 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA4P54764 ALG1L5P-201ENST00000482043 771 ntBASIC16.53■□□□□ 0.24
EPHA4P54764 SLC25A6P2-201ENST00000497974 877 ntBASIC16.53■□□□□ 0.24
EPHA4P54764 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
EPHA4P54764 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA4P54764 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA4P54764 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
EPHA4P54764 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA4P54764 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA4P54764 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA4P54764 AC016396.2-201ENST00000562575 1417 ntBASIC16.53■□□□□ 0.24
EPHA4P54764 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA4P54764 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA4P54764 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
EPHA4P54764 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.52■□□□□ 0.24
EPHA4P54764 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 ACTG1P14-201ENST00000446382 1122 ntBASIC16.52■□□□□ 0.24
EPHA4P54764 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.52■□□□□ 0.24
EPHA4P54764 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.52■□□□□ 0.24
EPHA4P54764 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.52■□□□□ 0.24
EPHA4P54764 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.52■□□□□ 0.24
EPHA4P54764 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.52■□□□□ 0.24
EPHA4P54764 ACTL9-202ENST00000612068 1252 ntBASIC16.52■□□□□ 0.24
EPHA4P54764 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA4P54764 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA4P54764 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms