Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 AC006116.8-202ENST00000587620 1550 ntBASIC16.73■□□□□ 0.27
PDX1P52945 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.73■□□□□ 0.27
PDX1P52945 CYMP-203ENST00000474680 1263 ntBASIC16.73■□□□□ 0.27
PDX1P52945 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.73■□□□□ 0.27
PDX1P52945 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.73■□□□□ 0.27
PDX1P52945 SNHG9-202ENST00000564014 471 ntBASIC16.73■□□□□ 0.27
PDX1P52945 OR7E47P-204ENST00000575924 449 ntBASIC16.73■□□□□ 0.27
PDX1P52945 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.73■□□□□ 0.27
PDX1P52945 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.73■□□□□ 0.27
PDX1P52945 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDX1P52945 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.72■□□□□ 0.27
PDX1P52945 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 ELL2P1-201ENST00000413990 1906 ntBASIC16.72■□□□□ 0.27
PDX1P52945 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
PDX1P52945 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PDX1P52945 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDX1P52945 PTCHD3P3-201ENST00000403073 906 ntBASIC16.72■□□□□ 0.27
PDX1P52945 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.72■□□□□ 0.27
PDX1P52945 MKNK2P1-201ENST00000437526 628 ntBASIC16.72■□□□□ 0.27
PDX1P52945 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.72■□□□□ 0.27
PDX1P52945 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.72■□□□□ 0.27
PDX1P52945 PDPK2P-202ENST00000562415 1191 ntBASIC16.72■□□□□ 0.27
PDX1P52945 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PDX1P52945 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.72■□□□□ 0.27
PDX1P52945 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PDX1P52945 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 AC009336.1-201ENST00000608941 1553 ntBASIC16.72■□□□□ 0.27
PDX1P52945 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDX1P52945 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.72■□□□□ 0.27
PDX1P52945 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.71■□□□□ 0.27
PDX1P52945 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.71■□□□□ 0.27
PDX1P52945 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.71■□□□□ 0.27
PDX1P52945 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PDX1P52945 CNN2P11-201ENST00000429351 262 ntBASIC16.71■□□□□ 0.27
PDX1P52945 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.71■□□□□ 0.27
PDX1P52945 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.71■□□□□ 0.27
PDX1P52945 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.71■□□□□ 0.27
PDX1P52945 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.71■□□□□ 0.27
PDX1P52945 STK19B-204ENST00000512515 211 ntBASIC16.71■□□□□ 0.27
PDX1P52945 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDX1P52945 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.71■□□□□ 0.27
PDX1P52945 AL353135.1-201ENST00000606729 504 ntBASIC16.71■□□□□ 0.27
PDX1P52945 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.71■□□□□ 0.27
PDX1P52945 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PDX1P52945 FZD10-202ENST00000539839 3282 ntBASIC16.71■□□□□ 0.27
PDX1P52945 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.71■□□□□ 0.27
PDX1P52945 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms