Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 AC004817.3-201ENST00000602957 2129 ntBASIC16.04■□□□□ 0.16
RNF144AP50876 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF144AP50876 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF144AP50876 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF144AP50876 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RNF144AP50876 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF144AP50876 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF144AP50876 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 AC111152.3-201ENST00000569699 673 ntBASIC16.04■□□□□ 0.16
RNF144AP50876 MIR5100-201ENST00000579544 119 ntBASIC16.04■□□□□ 0.16
RNF144AP50876 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.04■□□□□ 0.16
RNF144AP50876 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF144AP50876 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 AC148477.5-201ENST00000625164 1645 ntBASIC16.04■□□□□ 0.16
RNF144AP50876 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF144AP50876 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF144AP50876 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF144AP50876 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF144AP50876 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 TNRC18P3-201ENST00000441896 2691 ntBASIC16.03■□□□□ 0.16
RNF144AP50876 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF144AP50876 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RNF144AP50876 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF144AP50876 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 MIR3652-201ENST00000579335 131 ntBASIC16.03■□□□□ 0.16
RNF144AP50876 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF144AP50876 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF144AP50876 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF144AP50876 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF144AP50876 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNF144AP50876 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF144AP50876 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF144AP50876 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF144AP50876 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF144AP50876 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
RNF144AP50876 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF144AP50876 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF144AP50876 KLF4P1-201ENST00000412782 1185 ntBASIC16.02■□□□□ 0.16
RNF144AP50876 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF144AP50876 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.02■□□□□ 0.16
RNF144AP50876 STK19B-204ENST00000512515 211 ntBASIC16.02■□□□□ 0.16
RNF144AP50876 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF144AP50876 STK25P1-201ENST00000585406 838 ntBASIC16.02■□□□□ 0.16
RNF144AP50876 AL591684.3-201ENST00000605187 298 ntBASIC16.02■□□□□ 0.16
RNF144AP50876 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF144AP50876 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
RNF144AP50876 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RNF144AP50876 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNF144AP50876 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF144AP50876 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF144AP50876 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF144AP50876 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF144AP50876 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms