Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 FAM8A2P-201ENST00000528813 1142 ntBASIC19.09■□□□□ 0.65
HTTP42858 AC008735.3-201ENST00000596646 500 ntBASIC19.09■□□□□ 0.65
HTTP42858 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 AC068587.10-201ENST00000641210 219 ntBASIC19.09■□□□□ 0.65
HTTP42858 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
HTTP42858 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 AL023806.1-201ENST00000603994 1649 ntBASIC19.09■□□□□ 0.65
HTTP42858 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 KRT8P44-201ENST00000441609 1350 ntBASIC19.09■□□□□ 0.65
HTTP42858 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.09■□□□□ 0.65
HTTP42858 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HTTP42858 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.09■□□□□ 0.65
HTTP42858 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.09■□□□□ 0.65
HTTP42858 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.09■□□□□ 0.65
HTTP42858 CTBP2P3-201ENST00000585629 1255 ntBASIC19.09■□□□□ 0.65
HTTP42858 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HTTP42858 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.09■□□□□ 0.65
HTTP42858 AL512343.1-201ENST00000605837 169 ntBASIC19.09■□□□□ 0.65
HTTP42858 AL139099.5-201ENST00000635274 300 ntBASIC19.09■□□□□ 0.65
HTTP42858 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTTP42858 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HTTP42858 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HTTP42858 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HTTP42858 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HTTP42858 AC092933.1-201ENST00000393644 945 ntBASIC19.08■□□□□ 0.65
HTTP42858 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.08■□□□□ 0.65
HTTP42858 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.08■□□□□ 0.65
HTTP42858 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.08■□□□□ 0.65
HTTP42858 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.08■□□□□ 0.65
HTTP42858 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
HTTP42858 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
HTTP42858 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HTTP42858 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HTTP42858 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HTTP42858 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HTTP42858 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.08■□□□□ 0.64
HTTP42858 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.08■□□□□ 0.64
HTTP42858 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HTTP42858 HAUS4P1-201ENST00000406739 1145 ntBASIC19.08■□□□□ 0.64
HTTP42858 AC135586.1-201ENST00000539323 574 ntBASIC19.08■□□□□ 0.64
HTTP42858 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.08■□□□□ 0.64
HTTP42858 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.08■□□□□ 0.64
HTTP42858 AL031055.1-201ENST00000606362 631 ntBASIC19.08■□□□□ 0.64
HTTP42858 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
HTTP42858 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HTTP42858 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HTTP42858 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HTTP42858 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.08■□□□□ 0.64
HTTP42858 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.07■□□□□ 0.64
HTTP42858 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.07■□□□□ 0.64
HTTP42858 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.07■□□□□ 0.64
HTTP42858 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.07■□□□□ 0.64
HTTP42858 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HTTP42858 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HTTP42858 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.07■□□□□ 0.64
HTTP42858 TTTY23B-201ENST00000442790 549 ntBASIC19.07■□□□□ 0.64
HTTP42858 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.07■□□□□ 0.64
HTTP42858 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HTTP42858 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.07■□□□□ 0.64
HTTP42858 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.07■□□□□ 0.64
HTTP42858 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTTP42858 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTTP42858 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HTTP42858 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HTTP42858 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.06■□□□□ 0.64
HTTP42858 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.06■□□□□ 0.64
HTTP42858 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
HTTP42858 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
HTTP42858 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTTP42858 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms