Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HTR1EP28566 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
HTR1EP28566 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1EP28566 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HTR1EP28566 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1EP28566 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
HTR1EP28566 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.52■□□□□ 0.24
HTR1EP28566 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HTR1EP28566 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1EP28566 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1EP28566 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1EP28566 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
HTR1EP28566 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 HLA-F-220ENST00000434407 884 ntBASIC16.52■□□□□ 0.24
HTR1EP28566 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.52■□□□□ 0.24
HTR1EP28566 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
HTR1EP28566 AC112698.1-201ENST00000510299 916 ntBASIC16.52■□□□□ 0.24
HTR1EP28566 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1EP28566 TPSP2-201ENST00000561760 610 ntBASIC16.52■□□□□ 0.24
HTR1EP28566 AC012615.1-201ENST00000565797 1299 ntBASIC16.52■□□□□ 0.24
HTR1EP28566 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.52■□□□□ 0.24
HTR1EP28566 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1EP28566 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1EP28566 AC009154.2-201ENST00000621177 724 ntBASIC16.52■□□□□ 0.24
HTR1EP28566 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1EP28566 AC079602.3-201ENST00000623931 403 ntBASIC16.52■□□□□ 0.24
HTR1EP28566 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HTR1EP28566 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HTR1EP28566 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HTR1EP28566 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HTR1EP28566 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1EP28566 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1EP28566 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 TOB2P1-201ENST00000469761 992 ntBASIC16.51■□□□□ 0.23
HTR1EP28566 AP002469.2-201ENST00000531724 424 ntBASIC16.51■□□□□ 0.23
HTR1EP28566 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1EP28566 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1EP28566 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 AL136038.4-201ENST00000603606 1261 ntBASIC16.51■□□□□ 0.23
HTR1EP28566 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1EP28566 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HTR1EP28566 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1EP28566 AC092053.1-201ENST00000605787 1936 ntBASIC16.51■□□□□ 0.23
HTR1EP28566 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HTR1EP28566 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.5■□□□□ 0.23
HTR1EP28566 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1EP28566 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms