Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT4P19013 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT4P19013 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT4P19013 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT4P19013 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.33■□□□□ 0.36
KRT4P19013 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
KRT4P19013 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KRT4P19013 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 LINC01568-207ENST00000641790 1380 ntBASIC17.32■□□□□ 0.36
KRT4P19013 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 AP003733.1-201ENST00000491725 852 ntBASIC17.32■□□□□ 0.36
KRT4P19013 IGHV3-52-201ENST00000519770 353 ntBASIC17.32■□□□□ 0.36
KRT4P19013 AC140113.3-201ENST00000605663 199 ntBASIC17.32■□□□□ 0.36
KRT4P19013 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT4P19013 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT4P19013 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT4P19013 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 FAM8A6P-201ENST00000407496 1135 ntBASIC17.31■□□□□ 0.36
KRT4P19013 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT4P19013 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 AC019129.2-201ENST00000609837 1235 ntBASIC17.31■□□□□ 0.36
KRT4P19013 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
KRT4P19013 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT4P19013 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT4P19013 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT4P19013 SPDYE15P-201ENST00000424157 909 ntBASIC17.3■□□□□ 0.36
KRT4P19013 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 AC109462.3-201ENST00000573934 613 ntBASIC17.3■□□□□ 0.36
KRT4P19013 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 EGFEM1P-202ENST00000431685 1563 ntBASIC17.3■□□□□ 0.36
KRT4P19013 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT4P19013 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT4P19013 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms