Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.32■□□□□ 0.2
NCK1P16333 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.32■□□□□ 0.2
NCK1P16333 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.32■□□□□ 0.2
NCK1P16333 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
NCK1P16333 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.32■□□□□ 0.2
NCK1P16333 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.32■□□□□ 0.2
NCK1P16333 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 PAUPAR-201ENST00000630360 2965 ntBASIC16.32■□□□□ 0.2
NCK1P16333 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCK1P16333 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NCK1P16333 CYP2T1P-202ENST00000641596 2535 ntBASIC16.32■□□□□ 0.2
NCK1P16333 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.31■□□□□ 0.2
NCK1P16333 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 KRT17P2-201ENST00000300992 1314 ntBASIC16.31■□□□□ 0.2
NCK1P16333 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.31■□□□□ 0.2
NCK1P16333 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.31■□□□□ 0.2
NCK1P16333 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.31■□□□□ 0.2
NCK1P16333 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.31■□□□□ 0.2
NCK1P16333 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NCK1P16333 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.31■□□□□ 0.2
NCK1P16333 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.31■□□□□ 0.2
NCK1P16333 AC007950.2-201ENST00000615045 2347 ntBASIC16.31■□□□□ 0.2
NCK1P16333 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.31■□□□□ 0.2
NCK1P16333 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.31■□□□□ 0.2
NCK1P16333 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCK1P16333 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.31■□□□□ 0.2
NCK1P16333 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NCK1P16333 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NCK1P16333 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NCK1P16333 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.3■□□□□ 0.2
NCK1P16333 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
NCK1P16333 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NCK1P16333 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.3■□□□□ 0.2
NCK1P16333 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NCK1P16333 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 AL596257.1-201ENST00000641463 2694 ntBASIC16.3■□□□□ 0.2
NCK1P16333 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
NCK1P16333 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCK1P16333 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms