Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD8P13378 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXD8P13378 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXD8P13378 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD8P13378 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD8P13378 WASH6P-202ENST00000359512 1437 ntBASIC18.83■□□□□ 0.6
HOXD8P13378 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD8P13378 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXD8P13378 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD8P13378 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD8P13378 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 PMS2P4-201ENST00000412466 1052 ntBASIC18.82■□□□□ 0.6
HOXD8P13378 KRT18P32-201ENST00000424695 1287 ntBASIC18.82■□□□□ 0.6
HOXD8P13378 FAM86GP-201ENST00000448322 971 ntBASIC18.82■□□□□ 0.6
HOXD8P13378 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXD8P13378 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD8P13378 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD8P13378 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 AC087641.1-201ENST00000557561 1021 ntBASIC18.82■□□□□ 0.6
HOXD8P13378 AL031055.1-201ENST00000606362 631 ntBASIC18.82■□□□□ 0.6
HOXD8P13378 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.82■□□□□ 0.6
HOXD8P13378 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD8P13378 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXD8P13378 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXD8P13378 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD8P13378 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HOXD8P13378 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXD8P13378 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HOXD8P13378 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HOXD8P13378 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.81■□□□□ 0.6
HOXD8P13378 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXD8P13378 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXD8P13378 MIR4492-201ENST00000581627 80 ntBASIC18.81■□□□□ 0.6
HOXD8P13378 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 AC092364.2-202ENST00000597012 1073 ntBASIC18.81■□□□□ 0.6
HOXD8P13378 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD8P13378 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HOXD8P13378 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD8P13378 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD8P13378 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXD8P13378 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD8P13378 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD8P13378 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 CNN2P2-201ENST00000443536 909 ntBASIC18.8■□□□□ 0.6
HOXD8P13378 CNN2P3-201ENST00000450201 906 ntBASIC18.8■□□□□ 0.6
HOXD8P13378 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD8P13378 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 AC069262.1-201ENST00000539058 672 ntBASIC18.8■□□□□ 0.6
HOXD8P13378 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD8P13378 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXD8P13378 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 AL136317.3-201ENST00000618497 906 ntBASIC18.8■□□□□ 0.6
HOXD8P13378 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HOXD8P13378 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD8P13378 KRT8P49-201ENST00000604166 1432 ntBASIC18.8■□□□□ 0.6
HOXD8P13378 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOXD8P13378 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD8P13378 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms