Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.16■□□□□ 0.18
CCL4P13236 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL4P13236 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL4P13236 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 AL354751.1-201ENST00000412768 1863 ntBASIC16.16■□□□□ 0.18
CCL4P13236 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCL4P13236 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCL4P13236 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL4P13236 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL4P13236 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCL4P13236 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 KRT18P32-201ENST00000424695 1287 ntBASIC16.15■□□□□ 0.18
CCL4P13236 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL4P13236 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL4P13236 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 RN7SL589P-201ENST00000481268 310 ntBASIC16.15■□□□□ 0.18
CCL4P13236 AC069335.1-201ENST00000489972 472 ntBASIC16.15■□□□□ 0.18
CCL4P13236 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
CCL4P13236 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL4P13236 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
CCL4P13236 RARRES2P8-201ENST00000566335 367 ntBASIC16.15■□□□□ 0.18
CCL4P13236 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.15■□□□□ 0.18
CCL4P13236 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL4P13236 AL390955.2-201ENST00000603032 514 ntBASIC16.15■□□□□ 0.18
CCL4P13236 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CCL4P13236 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL4P13236 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL4P13236 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL4P13236 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
CCL4P13236 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCL4P13236 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCL4P13236 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.14■□□□□ 0.17
CCL4P13236 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL4P13236 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.14■□□□□ 0.17
CCL4P13236 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.14■□□□□ 0.17
CCL4P13236 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.14■□□□□ 0.17
CCL4P13236 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.14■□□□□ 0.17
CCL4P13236 AC005412.3-201ENST00000580309 715 ntBASIC16.14■□□□□ 0.17
CCL4P13236 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCL4P13236 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CCL4P13236 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCL4P13236 AC012569.1-201ENST00000591191 1524 ntBASIC16.14■□□□□ 0.17
CCL4P13236 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL4P13236 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL4P13236 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL4P13236 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL4P13236 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL4P13236 SPCS2P4-201ENST00000436160 681 ntBASIC16.13■□□□□ 0.17
CCL4P13236 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms