Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.22■□□□□ 0.83
TOP1P11387 KRT18P58-201ENST00000527480 1120 ntBASIC20.22■□□□□ 0.83
TOP1P11387 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.22■□□□□ 0.83
TOP1P11387 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.22■□□□□ 0.83
TOP1P11387 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.22■□□□□ 0.83
TOP1P11387 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.22■□□□□ 0.83
TOP1P11387 AC008667.4-201ENST00000607370 168 ntBASIC20.22■□□□□ 0.83
TOP1P11387 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TOP1P11387 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TOP1P11387 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.22■□□□□ 0.83
TOP1P11387 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TOP1P11387 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TOP1P11387 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.22■□□□□ 0.83
TOP1P11387 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOP1P11387 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.21■□□□□ 0.83
TOP1P11387 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.21■□□□□ 0.83
TOP1P11387 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 AC108751.1-201ENST00000490852 363 ntBASIC20.21■□□□□ 0.83
TOP1P11387 IGHV3-65-201ENST00000523210 341 ntBASIC20.21■□□□□ 0.83
TOP1P11387 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.21■□□□□ 0.83
TOP1P11387 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TOP1P11387 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.21■□□□□ 0.83
TOP1P11387 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOP1P11387 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
TOP1P11387 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 AL645608.8-201ENST00000606034 2086 ntBASIC20.2■□□□□ 0.82
TOP1P11387 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TOP1P11387 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
TOP1P11387 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.2■□□□□ 0.82
TOP1P11387 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TOP1P11387 AP002414.1-201ENST00000391405 1147 ntBASIC20.2■□□□□ 0.82
TOP1P11387 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TOP1P11387 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TOP1P11387 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
TOP1P11387 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.2■□□□□ 0.82
TOP1P11387 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TOP1P11387 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.2■□□□□ 0.82
TOP1P11387 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TOP1P11387 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TOP1P11387 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TOP1P11387 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TOP1P11387 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.19■□□□□ 0.82
TOP1P11387 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.19■□□□□ 0.82
TOP1P11387 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.19■□□□□ 0.82
TOP1P11387 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.19■□□□□ 0.82
TOP1P11387 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.19■□□□□ 0.82
TOP1P11387 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.19■□□□□ 0.82
TOP1P11387 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 AC027601.4-201ENST00000611259 610 ntBASIC20.19■□□□□ 0.82
TOP1P11387 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TOP1P11387 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.19■□□□□ 0.82
TOP1P11387 AL138688.1-201ENST00000624851 1594 ntBASIC20.19■□□□□ 0.82
TOP1P11387 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TOP1P11387 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms