Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CD28P10747 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 PI4KAP1-204ENST00000612579 1703 ntBASIC13.47□□□□□ -0.25
CD28P10747 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 BCAR1-209ENST00000546196 1340 ntBASIC13.47□□□□□ -0.25
CD28P10747 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.47□□□□□ -0.25
CD28P10747 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.47□□□□□ -0.25
CD28P10747 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.47□□□□□ -0.25
CD28P10747 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 AC004877.2-201ENST00000623941 599 ntBASIC13.47□□□□□ -0.25
CD28P10747 AC010507.1-201ENST00000633895 436 ntBASIC13.47□□□□□ -0.25
CD28P10747 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD28P10747 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.47□□□□□ -0.25
CD28P10747 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD28P10747 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD28P10747 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.46□□□□□ -0.25
CD28P10747 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.46□□□□□ -0.25
CD28P10747 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 AC138028.4-201ENST00000564984 1845 ntBASIC13.46□□□□□ -0.25
CD28P10747 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.46□□□□□ -0.25
CD28P10747 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CD28P10747 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.46□□□□□ -0.25
CD28P10747 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.46□□□□□ -0.25
CD28P10747 HTR5BP-201ENST00000430851 1154 ntBASIC13.46□□□□□ -0.25
CD28P10747 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.46□□□□□ -0.25
CD28P10747 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.46□□□□□ -0.25
CD28P10747 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.46□□□□□ -0.25
CD28P10747 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.46□□□□□ -0.25
CD28P10747 SNHG9-202ENST00000564014 471 ntBASIC13.46□□□□□ -0.25
CD28P10747 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.46□□□□□ -0.25
CD28P10747 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD28P10747 C20orf181-201ENST00000623918 480 ntBASIC13.46□□□□□ -0.25
CD28P10747 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD28P10747 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.46□□□□□ -0.26
CD28P10747 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.46□□□□□ -0.26
CD28P10747 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.46□□□□□ -0.26
CD28P10747 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms