Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALM3P0DP25 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CALM3P0DP25 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALM3P0DP25 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CALM3P0DP25 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALM3P0DP25 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CALM3P0DP25 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.97■□□□□ 0.79
CALM3P0DP25 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 PI4KAP1-204ENST00000612579 1703 ntBASIC19.96■□□□□ 0.79
CALM3P0DP25 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CALM3P0DP25 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 AC098831.1-202ENST00000438821 336 ntBASIC19.96■□□□□ 0.79
CALM3P0DP25 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.96■□□□□ 0.79
CALM3P0DP25 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.96■□□□□ 0.79
CALM3P0DP25 AC117500.6-201ENST00000624871 588 ntBASIC19.96■□□□□ 0.79
CALM3P0DP25 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.96■□□□□ 0.79
CALM3P0DP25 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 PKD1P1-201ENST00000458669 6805 ntBASIC19.96■□□□□ 0.79
CALM3P0DP25 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.96■□□□□ 0.79
CALM3P0DP25 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CALM3P0DP25 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.96■□□□□ 0.79
CALM3P0DP25 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.96■□□□□ 0.79
CALM3P0DP25 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.96■□□□□ 0.79
CALM3P0DP25 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CALM3P0DP25 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.95■□□□□ 0.78
CALM3P0DP25 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CALM3P0DP25 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.95■□□□□ 0.78
CALM3P0DP25 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.95■□□□□ 0.78
CALM3P0DP25 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.95■□□□□ 0.78
CALM3P0DP25 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CALM3P0DP25 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CALM3P0DP25 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CALM3P0DP25 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.95■□□□□ 0.78
CALM3P0DP25 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALM3P0DP25 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.94■□□□□ 0.78
CALM3P0DP25 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.94■□□□□ 0.78
CALM3P0DP25 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
CALM3P0DP25 IGHV3-22-201ENST00000520721 359 ntBASIC19.94■□□□□ 0.78
CALM3P0DP25 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALM3P0DP25 AC092053.1-201ENST00000605787 1936 ntBASIC19.94■□□□□ 0.78
CALM3P0DP25 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CALM3P0DP25 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.93■□□□□ 0.78
CALM3P0DP25 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALM3P0DP25 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALM3P0DP25 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.93■□□□□ 0.78
CALM3P0DP25 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALM3P0DP25 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.93■□□□□ 0.78
CALM3P0DP25 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.93■□□□□ 0.78
CALM3P0DP25 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALM3P0DP25 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALM3P0DP25 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CALM3P0DP25 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALM3P0DP25 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms