Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
FAM228BP0C875 TSSC2-201ENST00000450217 709 ntBASIC18.36■□□□□ 0.53
FAM228BP0C875 PMPCAP1-201ENST00000508114 1576 ntBASIC18.36■□□□□ 0.53
FAM228BP0C875 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.36■□□□□ 0.53
FAM228BP0C875 KRT18P21-201ENST00000515767 1272 ntBASIC18.36■□□□□ 0.53
FAM228BP0C875 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
FAM228BP0C875 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.36■□□□□ 0.53
FAM228BP0C875 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.36■□□□□ 0.53
FAM228BP0C875 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.36■□□□□ 0.53
FAM228BP0C875 TPSP2-201ENST00000561760 610 ntBASIC18.36■□□□□ 0.53
FAM228BP0C875 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.36■□□□□ 0.53
FAM228BP0C875 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FAM228BP0C875 AC148477.5-201ENST00000625164 1645 ntBASIC18.36■□□□□ 0.53
FAM228BP0C875 DOC2GP-204ENST00000639052 2548 ntBASIC18.36■□□□□ 0.53
FAM228BP0C875 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FAM228BP0C875 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM228BP0C875 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
FAM228BP0C875 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM228BP0C875 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FAM228BP0C875 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM228BP0C875 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.35■□□□□ 0.53
FAM228BP0C875 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FAM228BP0C875 RCN1P2-201ENST00000398357 915 ntBASIC18.35■□□□□ 0.53
FAM228BP0C875 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.35■□□□□ 0.53
FAM228BP0C875 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM228BP0C875 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.35■□□□□ 0.53
FAM228BP0C875 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FAM228BP0C875 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FAM228BP0C875 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
FAM228BP0C875 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM228BP0C875 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM228BP0C875 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FAM228BP0C875 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.34■□□□□ 0.53
FAM228BP0C875 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 AL645728.1-201ENST00000366221 2101 ntBASIC18.34■□□□□ 0.53
FAM228BP0C875 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FAM228BP0C875 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.34■□□□□ 0.53
FAM228BP0C875 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.34■□□□□ 0.53
FAM228BP0C875 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.34■□□□□ 0.53
FAM228BP0C875 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FAM228BP0C875 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM228BP0C875 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.34■□□□□ 0.53
FAM228BP0C875 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM228BP0C875 NSUN5P1-202ENST00000421140 1535 ntBASIC18.33■□□□□ 0.53
FAM228BP0C875 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.33■□□□□ 0.53
FAM228BP0C875 NSUN5P2-203ENST00000457352 1529 ntBASIC18.33■□□□□ 0.53
FAM228BP0C875 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
FAM228BP0C875 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
FAM228BP0C875 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FAM228BP0C875 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FAM228BP0C875 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
FAM228BP0C875 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.33■□□□□ 0.53
FAM228BP0C875 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
FAM228BP0C875 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM228BP0C875 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms