Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
FREM3P0C091 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 AL591424.1-201ENST00000442569 1213 ntBASIC15.63■□□□□ 0.09
FREM3P0C091 KRT18P3-201ENST00000451602 1288 ntBASIC15.63■□□□□ 0.09
FREM3P0C091 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.63■□□□□ 0.09
FREM3P0C091 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.63■□□□□ 0.09
FREM3P0C091 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
FREM3P0C091 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.63■□□□□ 0.09
FREM3P0C091 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
FREM3P0C091 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
FREM3P0C091 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FREM3P0C091 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FREM3P0C091 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 RPS2P28-201ENST00000314255 741 ntBASIC15.62■□□□□ 0.09
FREM3P0C091 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 MED15P5-201ENST00000423150 992 ntBASIC15.62■□□□□ 0.09
FREM3P0C091 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.62■□□□□ 0.09
FREM3P0C091 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.62■□□□□ 0.09
FREM3P0C091 PMS2P7-201ENST00000506558 1336 ntBASIC15.62■□□□□ 0.09
FREM3P0C091 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.62■□□□□ 0.09
FREM3P0C091 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FREM3P0C091 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 AC022211.2-201ENST00000585075 2527 ntBASIC15.62■□□□□ 0.09
FREM3P0C091 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.62■□□□□ 0.09
FREM3P0C091 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 FAM197Y3-203ENST00000618346 717 ntBASIC15.62■□□□□ 0.09
FREM3P0C091 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.62■□□□□ 0.09
FREM3P0C091 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.62■□□□□ 0.09
FREM3P0C091 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.62■□□□□ 0.09
FREM3P0C091 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FREM3P0C091 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FREM3P0C091 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
FREM3P0C091 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.61■□□□□ 0.09
FREM3P0C091 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.61■□□□□ 0.09
FREM3P0C091 AL589182.2-201ENST00000619332 1049 ntBASIC15.61■□□□□ 0.09
FREM3P0C091 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 ZNF259P1-201ENST00000407656 1365 ntBASIC15.61■□□□□ 0.09
FREM3P0C091 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
FREM3P0C091 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FREM3P0C091 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.61■□□□□ 0.09
FREM3P0C091 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FREM3P0C091 AC008667.4-201ENST00000607370 168 ntBASIC15.61■□□□□ 0.09
FREM3P0C091 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FREM3P0C091 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
FREM3P0C091 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.6■□□□□ 0.09
FREM3P0C091 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FREM3P0C091 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FREM3P0C091 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.6■□□□□ 0.09
FREM3P0C091 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.6■□□□□ 0.09
FREM3P0C091 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.6■□□□□ 0.09
FREM3P0C091 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FREM3P0C091 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FREM3P0C091 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.6■□□□□ 0.09
FREM3P0C091 AC002558.1-201ENST00000488906 803 ntBASIC15.6■□□□□ 0.09
FREM3P0C091 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FREM3P0C091 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.6■□□□□ 0.09
FREM3P0C091 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
FREM3P0C091 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms