Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SRPRAP08240 AL513480.1-201ENST00000451731 511 ntBASIC17.33■□□□□ 0.36
SRPRAP08240 AC004967.1-201ENST00000453589 447 ntBASIC17.33■□□□□ 0.36
SRPRAP08240 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.33■□□□□ 0.36
SRPRAP08240 YBX1P5-201ENST00000509441 847 ntBASIC17.33■□□□□ 0.36
SRPRAP08240 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SRPRAP08240 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
SRPRAP08240 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.33■□□□□ 0.36
SRPRAP08240 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.33■□□□□ 0.36
SRPRAP08240 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRPRAP08240 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRPRAP08240 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SRPRAP08240 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.33■□□□□ 0.36
SRPRAP08240 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRPRAP08240 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.33■□□□□ 0.36
SRPRAP08240 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SRPRAP08240 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRPRAP08240 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SRPRAP08240 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.33■□□□□ 0.36
SRPRAP08240 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
SRPRAP08240 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SRPRAP08240 AC211486.1-202ENST00000416371 468 ntBASIC17.32■□□□□ 0.36
SRPRAP08240 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.32■□□□□ 0.36
SRPRAP08240 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 AC211476.1-201ENST00000503899 468 ntBASIC17.32■□□□□ 0.36
SRPRAP08240 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.32■□□□□ 0.36
SRPRAP08240 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
SRPRAP08240 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.32■□□□□ 0.36
SRPRAP08240 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.32■□□□□ 0.36
SRPRAP08240 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 AC093525.9-201ENST00000624961 1746 ntBASIC17.32■□□□□ 0.36
SRPRAP08240 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPRAP08240 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.32■□□□□ 0.36
SRPRAP08240 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPRAP08240 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SRPRAP08240 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPRAP08240 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.31■□□□□ 0.36
SRPRAP08240 HTR5BP-201ENST00000430851 1154 ntBASIC17.31■□□□□ 0.36
SRPRAP08240 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPRAP08240 ALG1L5P-201ENST00000482043 771 ntBASIC17.31■□□□□ 0.36
SRPRAP08240 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.31■□□□□ 0.36
SRPRAP08240 AC107918.2-201ENST00000530817 355 ntBASIC17.31■□□□□ 0.36
SRPRAP08240 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.31■□□□□ 0.36
SRPRAP08240 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 AC134684.3-201ENST00000641758 218 ntBASIC17.31■□□□□ 0.36
SRPRAP08240 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPRAP08240 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPRAP08240 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPRAP08240 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
SRPRAP08240 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 AC116353.5-201ENST00000638148 1699 ntBASIC17.3■□□□□ 0.36
SRPRAP08240 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms