Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV3P03979 TPM4P1-201ENST00000436100 807 ntBASIC13.58□□□□□ -0.24
TRGV3P03979 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.58□□□□□ -0.24
TRGV3P03979 BX005266.1-201ENST00000473402 457 ntBASIC13.58□□□□□ -0.24
TRGV3P03979 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.58□□□□□ -0.24
TRGV3P03979 AF238378.1-201ENST00000526806 358 ntBASIC13.58□□□□□ -0.24
TRGV3P03979 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV3P03979 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV3P03979 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 AC016396.2-201ENST00000562575 1417 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 SIGLEC16-201ENST00000599858 1437 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 AC099398.1-201ENST00000567919 2776 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TRGV3P03979 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TRGV3P03979 FAAHP1-202ENST00000446499 1238 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 FGFR3P6-201ENST00000457012 610 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.57□□□□□ -0.24
TRGV3P03979 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 NKAPP1-205ENST00000585790 367 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV3P03979 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
TRGV3P03979 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRGV3P03979 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV3P03979 AC148477.5-201ENST00000625164 1645 ntBASIC13.57□□□□□ -0.24
TRGV3P03979 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 CROCCP2-202ENST00000412962 2773 ntBASIC13.56□□□□□ -0.24
TRGV3P03979 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV3P03979 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV3P03979 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms