Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT6AP02538 KLF4P1-201ENST00000412782 1185 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 PCED1CP-201ENST00000419887 785 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 DRAXINP1-201ENST00000437611 948 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT6AP02538 FAM210CP-201ENST00000445714 574 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 MINOS1P3-201ENST00000457048 203 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT6AP02538 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 AC124947.2-201ENST00000547118 1133 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT6AP02538 AP005901.3-202ENST00000581653 237 ntBASIC16.72■□□□□ 0.27
KRT6AP02538 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT6AP02538 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT6AP02538 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT6AP02538 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
KRT6AP02538 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 AC106886.4-201ENST00000623557 2502 ntBASIC16.71■□□□□ 0.27
KRT6AP02538 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT6AP02538 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT6AP02538 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KRT6AP02538 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT6AP02538 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT6AP02538 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT6AP02538 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.71■□□□□ 0.27
KRT6AP02538 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.71■□□□□ 0.27
KRT6AP02538 AD001527.2-201ENST00000622994 785 ntBASIC16.71■□□□□ 0.27
KRT6AP02538 IER3-202ENST00000376377 1350 ntBASIC16.71■□□□□ 0.27
KRT6AP02538 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 EGFEM1P-202ENST00000431685 1563 ntBASIC16.71■□□□□ 0.27
KRT6AP02538 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT6AP02538 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KRT6AP02538 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT6AP02538 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT6AP02538 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT6AP02538 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT6AP02538 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT6AP02538 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 AL135999.2-201ENST00000622438 1686 ntBASIC16.7■□□□□ 0.26
KRT6AP02538 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT6AP02538 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT6AP02538 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT6AP02538 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms