Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RBPMS2P1-201ENST00000437762 623 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 AC026150.2-201ENST00000564693 1156 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.89■□□□□ 0.77
COL2A1P02458 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.89■□□□□ 0.77
COL2A1P02458 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 AC021097.1-201ENST00000607902 574 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 AJ011932.1-201ENST00000621707 465 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL2A1P02458 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.89■□□□□ 0.77
COL2A1P02458 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL2A1P02458 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.88■□□□□ 0.77
COL2A1P02458 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.88■□□□□ 0.77
COL2A1P02458 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.88■□□□□ 0.77
COL2A1P02458 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 MIR346-201ENST00000362234 95 ntBASIC19.88■□□□□ 0.77
COL2A1P02458 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.88■□□□□ 0.77
COL2A1P02458 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.88■□□□□ 0.77
COL2A1P02458 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.88■□□□□ 0.77
COL2A1P02458 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.88■□□□□ 0.77
COL2A1P02458 IGHV3-62-201ENST00000520057 340 ntBASIC19.88■□□□□ 0.77
COL2A1P02458 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.88■□□□□ 0.77
COL2A1P02458 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COL2A1P02458 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL2A1P02458 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL2A1P02458 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL2A1P02458 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.87■□□□□ 0.77
COL2A1P02458 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.87■□□□□ 0.77
COL2A1P02458 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.87■□□□□ 0.77
COL2A1P02458 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.87■□□□□ 0.77
COL2A1P02458 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.87■□□□□ 0.77
COL2A1P02458 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.87■□□□□ 0.77
COL2A1P02458 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.87■□□□□ 0.77
COL2A1P02458 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL2A1P02458 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.87■□□□□ 0.77
COL2A1P02458 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.87■□□□□ 0.77
COL2A1P02458 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL2A1P02458 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.86■□□□□ 0.77
COL2A1P02458 SPDYE7P-202ENST00000420373 878 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 AC142381.1-201ENST00000426099 345 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 AC140878.1-201ENST00000565277 250 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 TUBB3P1-201ENST00000405796 1332 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 AC120498.9-201ENST00000339021 3867 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 LINC02012-201ENST00000608206 1725 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL2A1P02458 AC107890.1-201ENST00000422478 521 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 AC125807.1-201ENST00000483097 614 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 ALG1L8P-201ENST00000533887 760 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 DUX4L27-201ENST00000554796 1261 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.86■□□□□ 0.77
COL2A1P02458 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.86■□□□□ 0.77
COL2A1P02458 AC027307.2-201ENST00000591252 911 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 AC073389.1-201ENST00000595595 795 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 AL158211.3-201ENST00000607385 239 ntBASIC19.86■□□□□ 0.77
COL2A1P02458 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms