Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SNX4O95219 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNX4O95219 AL513477.1-201ENST00000602865 2407 ntBASIC16.25■□□□□ 0.19
SNX4O95219 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SNX4O95219 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 FAM220CP-201ENST00000395253 831 ntBASIC16.25■□□□□ 0.19
SNX4O95219 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.25■□□□□ 0.19
SNX4O95219 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.25■□□□□ 0.19
SNX4O95219 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.25■□□□□ 0.19
SNX4O95219 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX4O95219 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.25■□□□□ 0.19
SNX4O95219 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SNX4O95219 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
SNX4O95219 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNX4O95219 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNX4O95219 KRT8P47-201ENST00000604727 1398 ntBASIC16.25■□□□□ 0.19
SNX4O95219 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SNX4O95219 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNX4O95219 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.24■□□□□ 0.19
SNX4O95219 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 INTS4P1-201ENST00000438455 1935 ntBASIC16.24■□□□□ 0.19
SNX4O95219 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.24■□□□□ 0.19
SNX4O95219 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 UNC93B7-201ENST00000509439 705 ntBASIC16.24■□□□□ 0.19
SNX4O95219 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.24■□□□□ 0.19
SNX4O95219 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.24■□□□□ 0.19
SNX4O95219 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNX4O95219 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.24■□□□□ 0.19
SNX4O95219 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.24■□□□□ 0.19
SNX4O95219 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.24■□□□□ 0.19
SNX4O95219 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
SNX4O95219 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.24■□□□□ 0.19
SNX4O95219 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX4O95219 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX4O95219 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX4O95219 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX4O95219 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 AC006116.8-202ENST00000587620 1550 ntBASIC16.23■□□□□ 0.19
SNX4O95219 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SNX4O95219 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX4O95219 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 AC007967.3-201ENST00000434308 558 ntBASIC16.23■□□□□ 0.19
SNX4O95219 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX4O95219 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.23■□□□□ 0.19
SNX4O95219 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX4O95219 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX4O95219 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.23■□□□□ 0.19
SNX4O95219 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SNX4O95219 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNX4O95219 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SNX4O95219 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms