Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ALX3O95076 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ALX3O95076 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ALX3O95076 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.3■□□□□ 0.04
ALX3O95076 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ALX3O95076 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 BX276092.7-203ENST00000637198 1536 ntBASIC15.29■□□□□ 0.04
ALX3O95076 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ALX3O95076 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 KRT8P47-201ENST00000604727 1398 ntBASIC15.29■□□□□ 0.04
ALX3O95076 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.29■□□□□ 0.04
ALX3O95076 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.29■□□□□ 0.04
ALX3O95076 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 AC145285.6-201ENST00000604632 637 ntBASIC15.29■□□□□ 0.04
ALX3O95076 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 AL391807.1-203ENST00000604392 2365 ntBASIC15.29■□□□□ 0.04
ALX3O95076 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
ALX3O95076 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ALX3O95076 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.29■□□□□ 0.04
ALX3O95076 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.29■□□□□ 0.04
ALX3O95076 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ALX3O95076 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.28■□□□□ 0.04
ALX3O95076 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
ALX3O95076 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 HLA-F-220ENST00000434407 884 ntBASIC15.28■□□□□ 0.04
ALX3O95076 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 AL136038.4-201ENST00000603606 1261 ntBASIC15.28■□□□□ 0.04
ALX3O95076 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.28■□□□□ 0.04
ALX3O95076 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ALX3O95076 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ALX3O95076 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
ALX3O95076 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ALX3O95076 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ALX3O95076 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.27■□□□□ 0.04
ALX3O95076 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.27■□□□□ 0.04
ALX3O95076 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.27■□□□□ 0.04
ALX3O95076 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms