Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX30O94993 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 AC079776.2-201ENST00000641154 1609 ntBASIC16.06■□□□□ 0.16
SOX30O94993 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX30O94993 AP005117.1-201ENST00000584346 1413 ntBASIC16.06■□□□□ 0.16
SOX30O94993 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SOX30O94993 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX30O94993 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SOX30O94993 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX30O94993 LINC01711-201ENST00000598340 967 ntBASIC16.06■□□□□ 0.16
SOX30O94993 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
SOX30O94993 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX30O94993 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SOX30O94993 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX30O94993 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
SOX30O94993 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX30O94993 GPR89P-201ENST00000407924 1495 ntBASIC16.05■□□□□ 0.16
SOX30O94993 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SOX30O94993 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX30O94993 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX30O94993 AC106795.1-205ENST00000512851 1056 ntBASIC16.05■□□□□ 0.16
SOX30O94993 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX30O94993 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 CROCCP1-201ENST00000426910 5675 ntBASIC16.05■□□□□ 0.16
SOX30O94993 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX30O94993 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
SOX30O94993 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SOX30O94993 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX30O94993 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX30O94993 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX30O94993 NUS1P2-201ENST00000417358 873 ntBASIC16.04■□□□□ 0.16
SOX30O94993 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX30O94993 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.04■□□□□ 0.16
SOX30O94993 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX30O94993 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX30O94993 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX30O94993 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX30O94993 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SOX30O94993 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms