Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.74■□□□□ 0.43
TSPAN3O60637 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.74■□□□□ 0.43
TSPAN3O60637 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TSPAN3O60637 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 MRPL20P1-201ENST00000400819 433 ntBASIC17.74■□□□□ 0.43
TSPAN3O60637 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.74■□□□□ 0.43
TSPAN3O60637 VN2R19P-201ENST00000442399 1052 ntBASIC17.74■□□□□ 0.43
TSPAN3O60637 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.74■□□□□ 0.43
TSPAN3O60637 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.74■□□□□ 0.43
TSPAN3O60637 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.74■□□□□ 0.43
TSPAN3O60637 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.74■□□□□ 0.43
TSPAN3O60637 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.74■□□□□ 0.43
TSPAN3O60637 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.74■□□□□ 0.43
TSPAN3O60637 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.74■□□□□ 0.43
TSPAN3O60637 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TSPAN3O60637 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSPAN3O60637 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TSPAN3O60637 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.73■□□□□ 0.43
TSPAN3O60637 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.73■□□□□ 0.43
TSPAN3O60637 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.73■□□□□ 0.43
TSPAN3O60637 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.73■□□□□ 0.43
TSPAN3O60637 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.73■□□□□ 0.43
TSPAN3O60637 AC018845.2-201ENST00000568326 409 ntBASIC17.73■□□□□ 0.43
TSPAN3O60637 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.73■□□□□ 0.43
TSPAN3O60637 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TSPAN3O60637 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN3O60637 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.72■□□□□ 0.43
TSPAN3O60637 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TSPAN3O60637 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 BX842568.4-201ENST00000421222 227 ntBASIC17.72■□□□□ 0.43
TSPAN3O60637 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.72■□□□□ 0.43
TSPAN3O60637 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
TSPAN3O60637 GGTLC5P-201ENST00000617623 998 ntBASIC17.72■□□□□ 0.43
TSPAN3O60637 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.72■□□□□ 0.43
TSPAN3O60637 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TSPAN3O60637 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TSPAN3O60637 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.72■□□□□ 0.43
TSPAN3O60637 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.72■□□□□ 0.43
TSPAN3O60637 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN3O60637 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.72■□□□□ 0.43
TSPAN3O60637 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.71■□□□□ 0.43
TSPAN3O60637 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
TSPAN3O60637 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms