Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXS1O43638 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXS1O43638 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXS1O43638 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXS1O43638 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FOXS1O43638 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FOXS1O43638 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FOXS1O43638 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXS1O43638 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FOXS1O43638 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXS1O43638 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FOXS1O43638 DUX4L17-201ENST00000557360 1267 ntBASIC16.14■□□□□ 0.17
FOXS1O43638 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.14■□□□□ 0.17
FOXS1O43638 AC018845.2-201ENST00000568326 409 ntBASIC16.14■□□□□ 0.17
FOXS1O43638 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXS1O43638 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXS1O43638 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXS1O43638 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
FOXS1O43638 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
FOXS1O43638 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXS1O43638 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
FOXS1O43638 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 AC092053.1-201ENST00000605787 1936 ntBASIC16.13■□□□□ 0.17
FOXS1O43638 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
FOXS1O43638 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXS1O43638 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 FAM185BP-201ENST00000443595 716 ntBASIC16.13■□□□□ 0.17
FOXS1O43638 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXS1O43638 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 AC107918.2-201ENST00000530817 355 ntBASIC16.13■□□□□ 0.17
FOXS1O43638 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.13■□□□□ 0.17
FOXS1O43638 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXS1O43638 AC096734.2-201ENST00000562054 433 ntBASIC16.13■□□□□ 0.17
FOXS1O43638 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
FOXS1O43638 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 REXO1L3P-201ENST00000622202 1288 ntBASIC16.13■□□□□ 0.17
FOXS1O43638 AC010507.1-201ENST00000633895 436 ntBASIC16.13■□□□□ 0.17
FOXS1O43638 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
FOXS1O43638 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXS1O43638 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXS1O43638 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.12■□□□□ 0.17
FOXS1O43638 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
FOXS1O43638 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXS1O43638 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms