Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.35□□□□□ -0.43
PAX4O43316 AC005104.2-201ENST00000427818 678 ntBASIC12.35□□□□□ -0.43
PAX4O43316 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 KRT16P4-201ENST00000453883 522 ntBASIC12.35□□□□□ -0.43
PAX4O43316 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.35□□□□□ -0.43
PAX4O43316 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.35□□□□□ -0.43
PAX4O43316 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.35□□□□□ -0.43
PAX4O43316 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.35□□□□□ -0.43
PAX4O43316 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.35□□□□□ -0.43
PAX4O43316 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 BNIP3P18-201ENST00000593976 575 ntBASIC12.35□□□□□ -0.43
PAX4O43316 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 LINC01711-201ENST00000598340 967 ntBASIC12.35□□□□□ -0.43
PAX4O43316 AL591684.3-201ENST00000605187 298 ntBASIC12.35□□□□□ -0.43
PAX4O43316 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
PAX4O43316 AC114341.1-201ENST00000618070 349 ntBASIC12.35□□□□□ -0.43
PAX4O43316 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PAX4O43316 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.35□□□□□ -0.43
PAX4O43316 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.34□□□□□ -0.43
PAX4O43316 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 RCN1P2-201ENST00000398357 915 ntBASIC12.34□□□□□ -0.43
PAX4O43316 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.34□□□□□ -0.43
PAX4O43316 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.34□□□□□ -0.43
PAX4O43316 FOSL1P1-201ENST00000511041 816 ntBASIC12.34□□□□□ -0.43
PAX4O43316 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.34□□□□□ -0.43
PAX4O43316 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 AL121772.3-201ENST00000610840 674 ntBASIC12.34□□□□□ -0.43
PAX4O43316 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PAX4O43316 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.34□□□□□ -0.43
PAX4O43316 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.34□□□□□ -0.43
PAX4O43316 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.33□□□□□ -0.43
PAX4O43316 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
PAX4O43316 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.33□□□□□ -0.43
PAX4O43316 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PAX4O43316 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms