Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.7□□□□□ -0.06
SDCBPO00560 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SDCBPO00560 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SDCBPO00560 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.7□□□□□ -0.06
SDCBPO00560 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 AL671277.2-201ENST00000458060 996 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 DUX4L26-201ENST00000489078 1255 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 AC112698.1-201ENST00000510299 916 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 AC005332.3-201ENST00000589904 676 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 HYMAI.1-201ENST00000620949 238 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
SDCBPO00560 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 AC092053.1-201ENST00000605787 1936 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.7□□□□□ -0.06
SDCBPO00560 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SDCBPO00560 RNF216P1-203ENST00000404404 2427 ntBASIC14.7□□□□□ -0.06
SDCBPO00560 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SDCBPO00560 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SDCBPO00560 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 AC092171.3-201ENST00000610122 2651 ntBASIC14.69□□□□□ -0.06
SDCBPO00560 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.69□□□□□ -0.06
SDCBPO00560 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.69□□□□□ -0.06
SDCBPO00560 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.69□□□□□ -0.06
SDCBPO00560 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.69□□□□□ -0.06
SDCBPO00560 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SDCBPO00560 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.69□□□□□ -0.06
SDCBPO00560 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.69□□□□□ -0.06
SDCBPO00560 Z83836.1-201ENST00000624605 1642 ntBASIC14.69□□□□□ -0.06
SDCBPO00560 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.69□□□□□ -0.06
SDCBPO00560 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SDCBPO00560 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SDCBPO00560 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.68□□□□□ -0.06
SDCBPO00560 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SDCBPO00560 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms