Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 MIR3197-201ENST00000582241 73 ntBASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP17L11C9JVI0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
USP17L11C9JVI0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 MIR770-201ENST00000390219 98 ntBASIC19.89■□□□□ 0.77
USP17L11C9JVI0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 AC004449.1-201ENST00000564240 433 ntBASIC19.89■□□□□ 0.77
USP17L11C9JVI0 AC022145.2-201ENST00000598203 171 ntBASIC19.89■□□□□ 0.77
USP17L11C9JVI0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP17L11C9JVI0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 GNAS-203ENST00000306120 1878 ntBASIC19.88■□□□□ 0.77
USP17L11C9JVI0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.88■□□□□ 0.77
USP17L11C9JVI0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 AC002056.1-201ENST00000395613 760 ntBASIC19.87■□□□□ 0.77
USP17L11C9JVI0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 HLA-J-203ENST00000494367 1087 ntBASIC19.87■□□□□ 0.77
USP17L11C9JVI0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.87■□□□□ 0.77
USP17L11C9JVI0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP17L11C9JVI0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms