Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 RNF216P1-203ENST00000404404 2427 ntBASIC16.92■□□□□ 0.3
VGLL3A8MV65 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 DNM1P41-201ENST00000623634 3350 ntBASIC16.92■□□□□ 0.3
VGLL3A8MV65 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 DUX4L16-201ENST00000555130 1264 ntBASIC16.92■□□□□ 0.3
VGLL3A8MV65 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 AC010536.3-201ENST00000620306 533 ntBASIC16.92■□□□□ 0.3
VGLL3A8MV65 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 AC005912.2-201ENST00000619492 2400 ntBASIC16.92■□□□□ 0.3
VGLL3A8MV65 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VGLL3A8MV65 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VGLL3A8MV65 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 SLC7A5P2-201ENST00000553010 536 ntBASIC16.91■□□□□ 0.3
VGLL3A8MV65 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL3A8MV65 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL3A8MV65 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL3A8MV65 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.9■□□□□ 0.3
VGLL3A8MV65 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms