Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 DBET-201ENST00000630918 3363 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 FAM197Y1-201ENST00000421178 764 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AC024243.1-201ENST00000609234 778 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AL139011.1-202ENST00000642063 584 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AC010491.1-201ENST00000563101 2797 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 GGT4P-201ENST00000623672 1708 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 AC023157.3-201ENST00000619086 2088 ntBASIC12.14□□□□□ -0.47
LINC01546A6NGU7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.13□□□□□ -0.47
LINC01546A6NGU7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 AL355802.2-201ENST00000402069 882 ntBASIC12.13□□□□□ -0.47
LINC01546A6NGU7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms