Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 LINC01568-207ENST00000641790 1380 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 AL138966.2-201ENST00000621997 464 ntBASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV5A0A0B4J249 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 PCDHB17P-201ENST00000539533 2393 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 IGHGP-201ENST00000390555 1178 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 HLA-F-220ENST00000434407 884 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AC092597.1-201ENST00000487352 616 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AP003733.1-201ENST00000491725 852 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 MIR4497-201ENST00000583208 89 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AL353692.3-201ENST00000407031 1396 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 AC026691.1-201ENST00000602502 2017 ntBASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms