Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM56-RWDD3S4R434 AC087741.3-201ENST00000624270 1347 ntBASIC19.72■□□□□ 0.75
TMEM56-RWDD3S4R434 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 AP003733.4-201ENST00000623785 1697 ntBASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 AC044849.2-201ENST00000606596 710 ntBASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 LINC01124-201ENST00000409786 2117 ntBASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 AC021231.2-201ENST00000594613 730 ntBASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms