Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC148477.6-201ENST00000623746 465 ntBASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB16Q9NRJ7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHB16Q9NRJ7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHB16Q9NRJ7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 AC020928.2-201ENST00000588717 2197 ntBASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB16Q9NRJ7 ABHD17AP4-201ENST00000411545 909 ntBASIC20.75■□□□□ 0.91
PCDHB16Q9NRJ7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB16Q9NRJ7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB16Q9NRJ7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB16Q9NRJ7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB16Q9NRJ7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB16Q9NRJ7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 ZNRF2P2-203ENST00000454624 420 ntBASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 DUX4L11-201ENST00000611504 1267 ntBASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 DUX4L12-201ENST00000614593 1267 ntBASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 DUX4L14-201ENST00000621227 1267 ntBASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB16Q9NRJ7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 MIR219A2-201ENST00000608502 1504 ntBASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 AC010501.1-201ENST00000606270 1962 ntBASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB16Q9NRJ7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PCDHB16Q9NRJ7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB16Q9NRJ7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.7■□□□□ 0.91
PCDHB16Q9NRJ7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB16Q9NRJ7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
PCDHB16Q9NRJ7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB16Q9NRJ7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB16Q9NRJ7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCDHB16Q9NRJ7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 LINC00543-201ENST00000567234 1845 ntBASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB16Q9NRJ7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 AC126177.7-201ENST00000547904 679 ntBASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB16Q9NRJ7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB16Q9NRJ7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB16Q9NRJ7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB16Q9NRJ7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms