Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.21■□□□□ 0.83
Q9N2K0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Q9N2K0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9N2K0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.21■□□□□ 0.83
Q9N2K0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q9N2K0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9N2K0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.2■□□□□ 0.82
Q9N2K0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Q9N2K0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9N2K0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9N2K0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 ZNRF2P2-203ENST00000454624 420 ntBASIC20.19■□□□□ 0.82
Q9N2K0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Q9N2K0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9N2K0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Q9N2K0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.18■□□□□ 0.82
Q9N2K0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Q9N2K0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9N2K0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9N2K0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9N2K0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9N2K0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.17■□□□□ 0.82
Q9N2K0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.17■□□□□ 0.82
Q9N2K0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.17■□□□□ 0.82
Q9N2K0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.17■□□□□ 0.82
Q9N2K0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9N2K0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q9N2K0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q9N2K0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.16■□□□□ 0.82
Q9N2K0 AC022211.4-201ENST00000625094 2161 ntBASIC20.16■□□□□ 0.82
Q9N2K0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q9N2K0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q9N2K0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Q9N2K0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q9N2K0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q9N2K0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.16■□□□□ 0.82
Q9N2K0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q9N2K0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9N2K0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.15■□□□□ 0.82
Q9N2K0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.15■□□□□ 0.82
Q9N2K0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.15■□□□□ 0.82
Q9N2K0 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.15■□□□□ 0.82
Q9N2K0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q9N2K0 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.15■□□□□ 0.82
Q9N2K0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q9N2K0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q9N2K0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.15■□□□□ 0.82
Q9N2K0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q9N2K0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q9N2K0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q9N2K0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.14■□□□□ 0.81
Q9N2K0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q9N2K0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Q9N2K0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Q9N2K0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Q9N2K0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q9N2K0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9N2K0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9N2K0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9N2K0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q9N2K0 AC138932.3-201ENST00000567634 1902 ntBASIC20.12■□□□□ 0.81
Q9N2K0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.12■□□□□ 0.81
Q9N2K0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q9N2K0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q9N2K0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.11■□□□□ 0.81
Q9N2K0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.11■□□□□ 0.81
Q9N2K0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.11■□□□□ 0.81
Q9N2K0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Q9N2K0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9N2K0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9N2K0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Q9N2K0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9N2K0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9N2K0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.1■□□□□ 0.81
Q9N2K0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Q9N2K0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.1■□□□□ 0.81
Q9N2K0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.1■□□□□ 0.81
Q9N2K0 CR559946.2-201ENST00000623684 991 ntBASIC20.1■□□□□ 0.81
Q9N2K0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q9N2K0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q9N2K0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.09■□□□□ 0.81
Q9N2K0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Q9N2K0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q9N2K0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.09■□□□□ 0.81
Q9N2K0 AC126177.7-201ENST00000547904 679 ntBASIC20.09■□□□□ 0.81
Q9N2K0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Q9N2K0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms