Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.37■■□□□ 1.33
TUBB1Q9H4B7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
TUBB1Q9H4B7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.36■■□□□ 1.33
TUBB1Q9H4B7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TUBB1Q9H4B7 AC142381.3-201ENST00000568208 1670 ntBASIC23.36■■□□□ 1.33
TUBB1Q9H4B7 AC022211.4-201ENST00000625094 2161 ntBASIC23.36■■□□□ 1.33
TUBB1Q9H4B7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.35■■□□□ 1.33
TUBB1Q9H4B7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.34■■□□□ 1.33
TUBB1Q9H4B7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TUBB1Q9H4B7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.34■■□□□ 1.33
TUBB1Q9H4B7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TUBB1Q9H4B7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.34■■□□□ 1.33
TUBB1Q9H4B7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TUBB1Q9H4B7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TUBB1Q9H4B7 AC138932.3-201ENST00000567634 1902 ntBASIC23.33■■□□□ 1.33
TUBB1Q9H4B7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.33■■□□□ 1.33
TUBB1Q9H4B7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.33■■□□□ 1.33
TUBB1Q9H4B7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.33■■□□□ 1.33
TUBB1Q9H4B7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.33■■□□□ 1.33
TUBB1Q9H4B7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TUBB1Q9H4B7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TUBB1Q9H4B7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TUBB1Q9H4B7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
TUBB1Q9H4B7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TUBB1Q9H4B7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TUBB1Q9H4B7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBB1Q9H4B7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.3■■□□□ 1.32
TUBB1Q9H4B7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.3■■□□□ 1.32
TUBB1Q9H4B7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TUBB1Q9H4B7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TUBB1Q9H4B7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 ABHD17AP4-201ENST00000411545 909 ntBASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TUBB1Q9H4B7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.28■■□□□ 1.32
TUBB1Q9H4B7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TUBB1Q9H4B7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TUBB1Q9H4B7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TUBB1Q9H4B7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TUBB1Q9H4B7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 MIR3648-2-201ENST00000581792 180 ntBASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 MIR3648-1-201ENST00000615959 180 ntBASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TUBB1Q9H4B7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBB1Q9H4B7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.25■■□□□ 1.31
TUBB1Q9H4B7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 AL139125.2-201ENST00000623134 1869 ntBASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TUBB1Q9H4B7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.23■■□□□ 1.31
TUBB1Q9H4B7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TUBB1Q9H4B7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.23■■□□□ 1.31
TUBB1Q9H4B7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TUBB1Q9H4B7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TUBB1Q9H4B7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.23■■□□□ 1.31
TUBB1Q9H4B7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TUBB1Q9H4B7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.22■■□□□ 1.31
TUBB1Q9H4B7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.22■■□□□ 1.31
TUBB1Q9H4B7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms