Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL8AQ9BWD3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL8AQ9BWD3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL8AQ9BWD3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL8AQ9BWD3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.65■□□□□ 0.9
RTL8AQ9BWD3 AC010501.1-201ENST00000606270 1962 ntBASIC20.65■□□□□ 0.9
RTL8AQ9BWD3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL8AQ9BWD3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL8AQ9BWD3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL8AQ9BWD3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL8AQ9BWD3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL8AQ9BWD3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL8AQ9BWD3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL8AQ9BWD3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 ERN1-208ENST00000606895 2068 ntBASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL8AQ9BWD3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RTL8AQ9BWD3 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.6■□□□□ 0.89
RTL8AQ9BWD3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTL8AQ9BWD3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL8AQ9BWD3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL8AQ9BWD3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL8AQ9BWD3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL8AQ9BWD3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL8AQ9BWD3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL8AQ9BWD3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RTL8AQ9BWD3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL8AQ9BWD3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RTL8AQ9BWD3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL8AQ9BWD3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL8AQ9BWD3 RP9P-202ENST00000450133 1212 ntBASIC20.58■□□□□ 0.89
RTL8AQ9BWD3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTL8AQ9BWD3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.57■□□□□ 0.88
RTL8AQ9BWD3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.57■□□□□ 0.88
RTL8AQ9BWD3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.57■□□□□ 0.88
RTL8AQ9BWD3 AC007029.1-201ENST00000604183 313 ntBASIC20.57■□□□□ 0.88
RTL8AQ9BWD3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTL8AQ9BWD3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL8AQ9BWD3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RTL8AQ9BWD3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL8AQ9BWD3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.54■□□□□ 0.88
RTL8AQ9BWD3 AC093536.1-201ENST00000569153 554 ntBASIC20.54■□□□□ 0.88
RTL8AQ9BWD3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.54■□□□□ 0.88
RTL8AQ9BWD3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTL8AQ9BWD3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL8AQ9BWD3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 RNF126P1-201ENST00000567452 1320 ntBASIC20.53■□□□□ 0.88
RTL8AQ9BWD3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL8AQ9BWD3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL8AQ9BWD3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RTL8AQ9BWD3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RTL8AQ9BWD3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms