Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMTM3Q96MX0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CMTM3Q96MX0 LINC01124-201ENST00000409786 2117 ntBASIC20.8■□□□□ 0.92
CMTM3Q96MX0 AC097639.1-201ENST00000565519 1891 ntBASIC20.8■□□□□ 0.92
CMTM3Q96MX0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMTM3Q96MX0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CMTM3Q96MX0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMTM3Q96MX0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMTM3Q96MX0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.79■□□□□ 0.92
CMTM3Q96MX0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CMTM3Q96MX0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CMTM3Q96MX0 LINC00543-201ENST00000567234 1845 ntBASIC20.79■□□□□ 0.92
CMTM3Q96MX0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CMTM3Q96MX0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CMTM3Q96MX0 AC068473.5-201ENST00000616428 2072 ntBASIC20.79■□□□□ 0.92
CMTM3Q96MX0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CMTM3Q96MX0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CMTM3Q96MX0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CMTM3Q96MX0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CMTM3Q96MX0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.78■□□□□ 0.92
CMTM3Q96MX0 AC136428.2-201ENST00000563187 214 ntBASIC20.78■□□□□ 0.92
CMTM3Q96MX0 AC005559.1-201ENST00000589661 871 ntBASIC20.78■□□□□ 0.92
CMTM3Q96MX0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CMTM3Q96MX0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CMTM3Q96MX0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CMTM3Q96MX0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CMTM3Q96MX0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CMTM3Q96MX0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CMTM3Q96MX0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CMTM3Q96MX0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMTM3Q96MX0 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
CMTM3Q96MX0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMTM3Q96MX0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CMTM3Q96MX0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.74■□□□□ 0.91
CMTM3Q96MX0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMTM3Q96MX0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CMTM3Q96MX0 AC079834.2-201ENST00000609776 1949 ntBASIC20.74■□□□□ 0.91
CMTM3Q96MX0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.74■□□□□ 0.91
CMTM3Q96MX0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CMTM3Q96MX0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CMTM3Q96MX0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CMTM3Q96MX0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CMTM3Q96MX0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.73■□□□□ 0.91
CMTM3Q96MX0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CMTM3Q96MX0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
CMTM3Q96MX0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 AC097358.2-201ENST00000607541 1159 ntBASIC20.71■□□□□ 0.91
CMTM3Q96MX0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.71■□□□□ 0.91
CMTM3Q96MX0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMTM3Q96MX0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMTM3Q96MX0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMTM3Q96MX0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CMTM3Q96MX0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CMTM3Q96MX0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms