Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NAF1Q96HR8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.15■■□□□ 1.46
NAF1Q96HR8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NAF1Q96HR8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
NAF1Q96HR8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NAF1Q96HR8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NAF1Q96HR8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NAF1Q96HR8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
NAF1Q96HR8 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.14■■□□□ 1.45
NAF1Q96HR8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.14■■□□□ 1.45
NAF1Q96HR8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NAF1Q96HR8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NAF1Q96HR8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NAF1Q96HR8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NAF1Q96HR8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NAF1Q96HR8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NAF1Q96HR8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.13■■□□□ 1.45
NAF1Q96HR8 AC092296.2-201ENST00000589470 999 ntBASIC24.13■■□□□ 1.45
NAF1Q96HR8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NAF1Q96HR8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
NAF1Q96HR8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NAF1Q96HR8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
NAF1Q96HR8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NAF1Q96HR8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NAF1Q96HR8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NAF1Q96HR8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.12■■□□□ 1.45
NAF1Q96HR8 DUX4L18-201ENST00000553347 1267 ntBASIC24.12■■□□□ 1.45
NAF1Q96HR8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.12■■□□□ 1.45
NAF1Q96HR8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NAF1Q96HR8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NAF1Q96HR8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NAF1Q96HR8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
NAF1Q96HR8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NAF1Q96HR8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
NAF1Q96HR8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
NAF1Q96HR8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NAF1Q96HR8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
NAF1Q96HR8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NAF1Q96HR8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NAF1Q96HR8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NAF1Q96HR8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.1■■□□□ 1.45
NAF1Q96HR8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NAF1Q96HR8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NAF1Q96HR8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NAF1Q96HR8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NAF1Q96HR8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NAF1Q96HR8 AC133561.1-201ENST00000568600 2415 ntBASIC24.08■■□□□ 1.45
NAF1Q96HR8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.08■■□□□ 1.45
NAF1Q96HR8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NAF1Q96HR8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.08■■□□□ 1.45
NAF1Q96HR8 ECEL1P2-201ENST00000461596 1295 ntBASIC24.08■■□□□ 1.45
NAF1Q96HR8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.08■■□□□ 1.45
NAF1Q96HR8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NAF1Q96HR8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NAF1Q96HR8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
NAF1Q96HR8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NAF1Q96HR8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.07■■□□□ 1.44
NAF1Q96HR8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.07■■□□□ 1.44
NAF1Q96HR8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NAF1Q96HR8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.07■■□□□ 1.44
NAF1Q96HR8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
NAF1Q96HR8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
NAF1Q96HR8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NAF1Q96HR8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.06■■□□□ 1.44
NAF1Q96HR8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.05■■□□□ 1.44
NAF1Q96HR8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NAF1Q96HR8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.05■■□□□ 1.44
NAF1Q96HR8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
NAF1Q96HR8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
NAF1Q96HR8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NAF1Q96HR8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NAF1Q96HR8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.03■■□□□ 1.44
NAF1Q96HR8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
NAF1Q96HR8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NAF1Q96HR8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.03■■□□□ 1.44
NAF1Q96HR8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NAF1Q96HR8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.03■■□□□ 1.44
NAF1Q96HR8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NAF1Q96HR8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.03■■□□□ 1.44
NAF1Q96HR8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.02■■□□□ 1.44
NAF1Q96HR8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.02■■□□□ 1.44
NAF1Q96HR8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NAF1Q96HR8 AC129492.7-201ENST00000622992 756 ntBASIC24.02■■□□□ 1.44
NAF1Q96HR8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NAF1Q96HR8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
NAF1Q96HR8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NAF1Q96HR8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NAF1Q96HR8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.01■■□□□ 1.43
NAF1Q96HR8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.01■■□□□ 1.43
NAF1Q96HR8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.01■■□□□ 1.43
NAF1Q96HR8 AL035685.1-201ENST00000636663 812 ntBASIC24.01■■□□□ 1.43
NAF1Q96HR8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NAF1Q96HR8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.01■■□□□ 1.43
NAF1Q96HR8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms