Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM116Q8NCL8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM116Q8NCL8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
TMEM116Q8NCL8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TMEM116Q8NCL8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.02■□□□□ 0.63
TMEM116Q8NCL8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM116Q8NCL8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM116Q8NCL8 AC016575.1-201ENST00000607026 382 ntBASIC19.01■□□□□ 0.63
TMEM116Q8NCL8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.01■□□□□ 0.63
TMEM116Q8NCL8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM116Q8NCL8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM116Q8NCL8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TMEM116Q8NCL8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM116Q8NCL8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19■□□□□ 0.63
TMEM116Q8NCL8 AL359258.2-201ENST00000564063 1566 ntBASIC19■□□□□ 0.63
TMEM116Q8NCL8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.99■□□□□ 0.63
TMEM116Q8NCL8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM116Q8NCL8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TMEM116Q8NCL8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM116Q8NCL8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM116Q8NCL8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TMEM116Q8NCL8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 HLA-V-202ENST00000446817 847 ntBASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM116Q8NCL8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM116Q8NCL8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM116Q8NCL8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM116Q8NCL8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM116Q8NCL8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM116Q8NCL8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM116Q8NCL8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM116Q8NCL8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM116Q8NCL8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM116Q8NCL8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM116Q8NCL8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM116Q8NCL8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM116Q8NCL8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM116Q8NCL8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM116Q8NCL8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM116Q8NCL8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM116Q8NCL8 AL359504.2-201ENST00000605506 1601 ntBASIC18.95■□□□□ 0.62
TMEM116Q8NCL8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TMEM116Q8NCL8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM116Q8NCL8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM116Q8NCL8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM116Q8NCL8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM116Q8NCL8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 AC126177.7-201ENST00000547904 679 ntBASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 AC096887.2-201ENST00000623443 1957 ntBASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM116Q8NCL8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 AC142381.3-201ENST00000568208 1670 ntBASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM116Q8NCL8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM116Q8NCL8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM116Q8NCL8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms