Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2BBQ8N257 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
HIST3H2BBQ8N257 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIST3H2BBQ8N257 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H2BBQ8N257 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H2BBQ8N257 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HIST3H2BBQ8N257 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST3H2BBQ8N257 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H2BBQ8N257 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H2BBQ8N257 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST3H2BBQ8N257 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HIST3H2BBQ8N257 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST3H2BBQ8N257 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H2BBQ8N257 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H2BBQ8N257 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.24■□□□□ 0.51
HIST3H2BBQ8N257 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST3H2BBQ8N257 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 LINC01124-201ENST00000409786 2117 ntBASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 AC010864.1-201ENST00000609407 1511 ntBASIC18.23■□□□□ 0.51
HIST3H2BBQ8N257 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H2BBQ8N257 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 AC100797.4-201ENST00000631653 1827 ntBASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 EP400NL-214ENST00000641289 2402 ntBASIC18.21■□□□□ 0.51
HIST3H2BBQ8N257 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H2BBQ8N257 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H2BBQ8N257 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H2BBQ8N257 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H2BBQ8N257 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
HIST3H2BBQ8N257 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H2BBQ8N257 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H2BBQ8N257 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HIST3H2BBQ8N257 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H2BBQ8N257 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H2BBQ8N257 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H2BBQ8N257 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H2BBQ8N257 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST3H2BBQ8N257 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST3H2BBQ8N257 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST3H2BBQ8N257 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST3H2BBQ8N257 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 AC096887.2-201ENST00000623443 1957 ntBASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 AP002414.2-202ENST00000590929 1450 ntBASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST3H2BBQ8N257 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.14■□□□□ 0.49
HIST3H2BBQ8N257 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST3H2BBQ8N257 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST3H2BBQ8N257 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST3H2BBQ8N257 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST3H2BBQ8N257 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST3H2BBQ8N257 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST3H2BBQ8N257 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST3H2BBQ8N257 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms