Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SHFQ7M4L6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.7■■□□□ 1.06
SHFQ7M4L6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.7■■□□□ 1.06
SHFQ7M4L6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.7■■□□□ 1.06
SHFQ7M4L6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHFQ7M4L6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SHFQ7M4L6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.69■■□□□ 1.06
SHFQ7M4L6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SHFQ7M4L6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SHFQ7M4L6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHFQ7M4L6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.69■■□□□ 1.06
SHFQ7M4L6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHFQ7M4L6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SHFQ7M4L6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SHFQ7M4L6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.68■■□□□ 1.06
SHFQ7M4L6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.68■■□□□ 1.06
SHFQ7M4L6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHFQ7M4L6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHFQ7M4L6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.68■■□□□ 1.06
SHFQ7M4L6 AC096887.2-201ENST00000623443 1957 ntBASIC21.68■■□□□ 1.06
SHFQ7M4L6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHFQ7M4L6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHFQ7M4L6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.67■■□□□ 1.06
SHFQ7M4L6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHFQ7M4L6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SHFQ7M4L6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHFQ7M4L6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHFQ7M4L6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHFQ7M4L6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.67■■□□□ 1.06
SHFQ7M4L6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHFQ7M4L6 AL139125.2-201ENST00000623134 1869 ntBASIC21.66■■□□□ 1.06
SHFQ7M4L6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.66■■□□□ 1.06
SHFQ7M4L6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHFQ7M4L6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SHFQ7M4L6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHFQ7M4L6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHFQ7M4L6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHFQ7M4L6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHFQ7M4L6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.66■■□□□ 1.06
SHFQ7M4L6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SHFQ7M4L6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHFQ7M4L6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHFQ7M4L6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHFQ7M4L6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SHFQ7M4L6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.65■■□□□ 1.06
SHFQ7M4L6 DUX4L11-201ENST00000611504 1267 ntBASIC21.65■■□□□ 1.06
SHFQ7M4L6 DUX4L12-201ENST00000614593 1267 ntBASIC21.65■■□□□ 1.06
SHFQ7M4L6 DUX4L14-201ENST00000621227 1267 ntBASIC21.65■■□□□ 1.06
SHFQ7M4L6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHFQ7M4L6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHFQ7M4L6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHFQ7M4L6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SHFQ7M4L6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHFQ7M4L6 AC148477.6-201ENST00000623746 465 ntBASIC21.64■■□□□ 1.05
SHFQ7M4L6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHFQ7M4L6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
SHFQ7M4L6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHFQ7M4L6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHFQ7M4L6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHFQ7M4L6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.63■■□□□ 1.05
SHFQ7M4L6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SHFQ7M4L6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.63■■□□□ 1.05
SHFQ7M4L6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHFQ7M4L6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SHFQ7M4L6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.63■■□□□ 1.05
SHFQ7M4L6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
SHFQ7M4L6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.62■■□□□ 1.05
SHFQ7M4L6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.62■■□□□ 1.05
SHFQ7M4L6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.62■■□□□ 1.05
SHFQ7M4L6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.62■■□□□ 1.05
SHFQ7M4L6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHFQ7M4L6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.61■■□□□ 1.05
SHFQ7M4L6 MIR219A2-201ENST00000608502 1504 ntBASIC21.61■■□□□ 1.05
SHFQ7M4L6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.61■■□□□ 1.05
SHFQ7M4L6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.61■■□□□ 1.05
SHFQ7M4L6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
SHFQ7M4L6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHFQ7M4L6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.61■■□□□ 1.05
SHFQ7M4L6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHFQ7M4L6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHFQ7M4L6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHFQ7M4L6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.6■■□□□ 1.05
SHFQ7M4L6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHFQ7M4L6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHFQ7M4L6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHFQ7M4L6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms